Bandeau NGS

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Biopole

UMR7365 CNRS-Université de Lorraine
Ingénierie Moléculaire et Physiopathologie Articulaire (IMoPA)
Biopôle, Campus Brabois-Santé
9 Avenue de la Forêt de Haye, BP 20199
54505 VANDOEUVRE-LES-NANCY

yuri.motorin [at] univ-lorraine.fr +33 3.72.74.66.29 English, French, Russe / UMR7365 IMoPA

skills

  • Molecular Biology
  • Expert in RNA Biology
  • Next-Generation Sequencing
  • RNA modifications (Epitranscriptomics)
  • Bioinformatics

Biography

Education

  • 1999 : Habilitation to conduct research (HDR), University of Paris Sud, Orsay
  • 1989 : phD Thesis in Chemistry, Institute of Biochemistry A.N. Bakh, Moscow
  • 1985-1989 : phD, Evolutionary Biochemistry Lab, Institute of Biochemistry A.N. Bakh, Moscow
  • 1985 : Master Thesis (DEA), Lomonossov University of Moscow, Evolutionary Biochemistry Lab, Institute of Biochemistry A.N. Bakh, Moscow

Experiences

  • 2000-Present : Professor of Molecular Biology at the Université de Lorraine, Nancy, France. Ingénierie Moléculaire et Physiopathologie Articulaire (IMoPA) lab, UMR7365 CNRS-Université de Lorraine. Co-PI of the team "RNA-RNP Maturation-Structure-Fonction", axis "New technologies for RNA modifications detection"
  • 1999-2000 : Associated Researcher, Maturation des ARN et Enzymologie Moléculaire laboratory, UMR 7567 UHP-CNRS, Nancy, France
  • 1998-1999 : Associated Researcher, Enzymology laboratory, Gif-sur-Yvette, France
  • 1994-1997 : Postdoc, Enzymology laboratory, Gif-sur-Yvette, France
  • 1993-1994 : Postdoc, Enzymology laboratory, Gif-sur-Yvette, France
  • 1991-1993 : Researcher, Institute of Biochemistry A.N. Bakh, Moscow
  • 1992 : Postdoc, Enzymology laboratory, Gif-sur-Yvette, France
  • 1989-1991 : Researcher, Institute of Biochemistry A.N. Bakh, Moscow
  • 1985-1989 : Junior scientist, Institute of Biochemistry A.N. Bakh, Moscow

Responsabilities

  • Director of UMS2008 IBSLor, CNRS-UL-INSERM
  • Co-PI of team 1 "RNA-RNP, Structure-Fonction-Maturation" of IMoPA  laboratory (UMR7365 CNRS-Université de Lorraine) and in charge of the axis "New technologies for RNA modifications detection"
  • Member of management commitee of the COST action EPITRAN (2017-2021)
  • Scientific Partner of ANR - PRC grant "RiboMet" (2021-2024)
  • Coordinator of Regional Program FRCR "ViroMod" (2021-2024)
  • Member of Editorial Board for journals Scientific Reports (Nature Group) et Genes
  • Referee for different journals (Nature, Nature Biotechnology, Nucleic Acids Research, Scientific Reports, WIRES RNA, RNA Biology, RNA, PLoS One, BMC Biochemistry, International Journal of Molecular Sciences / Reactome website, Methods Elsevier, Genes)
  • Expert for national and international funding agencies

research

Research
Topics

  • From September 2000 on, analysis of RNA modifications
    • Study and characterization of a new family of pseudouridine synthases
    • Study and Characterization of a multifunctional RNA:pseudouridine-synthase responsible of pseudouridines in tRNA, U2 snRNA and 5S rRNA in yeast S. cerevisiae
    • Study of RNA:m5C-methyltransferases

  • In 2008-2009, collaboration project with the team of Dr Mark Helm at the University of Heildeberg (Germany)
    • Use of chemicals for specific RNA labelling

  • From 2011 on, in collaboration with Pr Mark Helm, development of high-throughput approaches to identify and characterize of RNA modifications 
    • Development of RT-seq (m1A)
    • Development of RiboMethSeq (2'-O-Me)
    • Development of AlkAnilineSeq (m3C and m7G)
    • Development of HydraPsiSeq (Psi)

Key
Results

  • High-throughput approaches to study RNA modifications

Ringeard M, Marchand V, Decroly E, Motorin Y, Bennasser Y. FTSJ3 is an RNA 2'-O-methyltransferase recruited by HIV to avoid innate immune sensing. Nature. 2019 Jan 9. doi: 10.1038/s41586-018-0841-4. PMID:30626973.

Marchand V, Pichot F, Neybecker P, Ayadi L, Bourguignon-Igel V, Wacheul L, Lafontaine DLJ, Pinzano A, Helm M, Motorin Y. HydraPsiSeq: a method for systematic and quantitative mapping of pseudouridines in RNA. Nucleic Acids Res. 2020 Sep 25 : gkaa769. doi:10.3390/genes11080950

Marchand V, Ayadi L, Ernst FGM, Hertler J, Bourguignon-Igel V, Galvanin A, Kotter A, Helm M, Lafontaine DLJ, Motorin Y. AlkAniline-Seq: Profiling of m(7)G and m(3)C RNA Modifications at Single Nucleotide Resolution. Angew Chem Int Ed Engl. 2018 Dec 17 ; 57(51):16785-16790. doi: 10.1002/anie.201810946. PMID: 30370969.

Marchand V, Blanloeil-Oillo F, Helm M, Motorin Y. Illumina-based RiboMethSeq approach for mapping of 2'-O-Me residues in RNA. Nucleic Acids Res. 2016 Sep19 ; 44(16):e135. doi: 10.1093/nar/gkw547. PMID: 27302133.

  • Characterization of m5C-methyltransferases

Bourgeois G, Ney M, Gaspar I, Aigueperse C, Schaefer M, Kellner S, Helm M, Motorin Y. Eukaryotic rRNA Modification by Yeast 5-Methylcytosine-Methyltransferases and Human Proliferation-Associated Antigen p120. PLoS One. 2015 Jul 21 ; 10(7):e0133321. doi: 10.1371/journal.pone.0133321. PMID: 26196125.

Motorin Y, Burhenne J, Teimer R, Koynov K, Willnow S, Weinhold E, Helm M. Expanding the chemical scope of RNA:methyltransferases to site-specific alkynylation of RNA for click labeling. Nucleic Acids Res. 2011 Mar ; 39(5):1943-52. doi: 10.1093/nar/gkq825. PMID:21037259.

  • Characterization of pseudouridines-synthases

Behm-Ansmant I, Branlant C, Motorin Y. The Saccharomyces cerevisiae Pus2 protein encoded by YGL063w ORF is a mitochondrial tRNA:Psi27/28-synthase. RNA.2007 Oct ; 13(10):1641-7. PMID: 17684231.

Behm-Ansmant I, Massenet S, Immel F, Patton JR, Motorin Y, Branlant C. A previously unidentified activity of yeast and mouse RNA:pseudouridine synthases 1 (Pus1p) on tRNAs. RNA. 2006 Aug ; 12(8):1583-93. PMID:16804160.

Publications

teachings

Teaching

  • Molecular Biology Lectures at Bachelor L3 and Master M1, M2 levels of the Université de Lorraine
  • From 2013, Director of international M2 program RNA Enzyme Sciences at the Université de Lorraine